STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1282PFAM: Ig domain protein, group 1 domain protein; KEGG: mpa:MAP3163 hypothetical protein. (465 aa)    
Predicted Functional Partners:
Noca_1284
PFAM: histidine triad (HIT) protein; KEGG: sus:Acid_2826 histidine triad (HIT) protein.
  
    0.718
Noca_1283
KEGG: rxy:Rxyl_2608 transglycosylase-associated protein.
       0.714
Noca_1281
PFAM: peptidase C11, clostripain; KEGG: mac:MA4003 clostripain.
       0.548
Noca_1286
KEGG: sco:SCO6705 secreted protein.
 
     0.494
Noca_1285
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV7008 putative 3-oxoacyl-ACP reductase.
       0.487
Noca_3369
KEGG: dra:DR0603 cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domains protein.
  
     0.434
Noca_1879
KEGG: rha:RHA1_ro02551 hypothetical protein.
  
     0.425
Noca_1714
KEGG: mpa:MAP3318c hypothetical protein.
  
     0.419
Noca_1216
KEGG: mmc:Mmcs_5112 hypothetical protein.
  
     0.404
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.