Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_1283KEGG: rxy:Rxyl_2608 transglycosylase-associated protein. (93 aa)    
Predicted Functional Partners:
Noca_1284
PFAM: histidine triad (HIT) protein; KEGG: sus:Acid_2826 histidine triad (HIT) protein.
       0.773
Noca_1282
PFAM: Ig domain protein, group 1 domain protein; KEGG: mpa:MAP3163 hypothetical protein.
       0.714
Noca_1285
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV7008 putative 3-oxoacyl-ACP reductase.
       0.523
Noca_1281
PFAM: peptidase C11, clostripain; KEGG: mac:MA4003 clostripain.
       0.510
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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