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Noca_1283 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1283" - Transglycosylase-associated protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1283Transglycosylase-associated protein (93 aa)    
Predicted Functional Partners:
Noca_1284
Histidine triad (HIT) protein (142 aa)
              0.859
Noca_1282
Ig domain-containing protein (465 aa)
              0.796
Noca_1285
Short-chain dehydrogenase/reductase SDR (255 aa)
              0.589
Noca_1281
Peptidase C11, clostripain (657 aa)
              0.576
Noca_1286
Hypothetical protein (342 aa)
              0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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