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Noca_1292 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1292" - Regulatory proteins IclR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1292Regulatory proteins IclR (226 aa)    
Predicted Functional Partners:
Noca_1291
Type III restriction enzyme, res subunit (598 aa)
              0.862
Noca_1290
Hypothetical protein (107 aa)
              0.859
Noca_4095
IclR family transcriptional regulator (269 aa)
   
          0.777
Noca_0681
Regulatory proteins IclR (256 aa)
   
          0.777
Noca_1652
IclR family transcriptional regulator (257 aa)
   
          0.775
Noca_3768
Regulatory proteins IclR (252 aa)
   
          0.773
Noca_0687
Regulatory proteins IclR (263 aa)
   
          0.772
Noca_1008
Regulatory proteins IclR (133 aa)
   
          0.759
Noca_4402
Regulatory proteins IclR (256 aa)
   
          0.750
Noca_3299
Regulatory proteins IclR (240 aa)
   
          0.750
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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