STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1297Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: rha:RHA1_ro05520 possible transcriptional regulator, MarR family. (157 aa)    
Predicted Functional Partners:
Noca_1296
PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa4770 putative transporter.
 
   
 0.899
Noca_1298
PFAM: protein of unknown function DUF1697; KEGG: lic:LIC10638 hypothetical protein.
       0.569
Noca_1299
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sco:SCO2015 putative nucleotidase; Belongs to the 5'-nucleotidase family.
       0.446
Noca_1664
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0484 transcriptional regulator, TetR family.
  
   
 0.437
Noca_1308
KEGG: sco:SCO2915 hypothetical protein.
 
   
 0.404
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.