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Noca_1297 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1297" - Regulatory protein MarR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1297Regulatory protein MarR (157 aa)    
Predicted Functional Partners:
Noca_1296
Major facilitator transporter (406 aa)
 
          0.895
Noca_1299
5’-nucleotidase domain-containing protein (615 aa)
 
   
  0.720
Noca_1384
Hypothetical protein (184 aa)
   
          0.679
Noca_1298
Hypothetical protein (178 aa)
              0.651
Noca_3664
Regulatory protein LuxR (215 aa)
     
 
  0.466
Noca_3643
Two component LuxR family transcriptional regulator (215 aa)
     
 
  0.466
Noca_3606
Regulatory protein LuxR (229 aa)
     
 
  0.466
Noca_3488
Response regulator receiver (229 aa)
     
 
  0.466
Noca_3120
Response regulator receiver (212 aa)
     
 
  0.466
Noca_2943
Two component LuxR family transcriptional regulator (215 aa)
     
 
  0.466
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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