STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1301PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_5114 isochorismatase hydrolase. (194 aa)    
Predicted Functional Partners:
Noca_1307
Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
 
 0.996
Noca_0542
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ccr:CC1928 inosine-uridine preferring nucleoside hydrolase.
  
  
 0.923
cobB
PFAM: Silent information regulator protein Sir2; KEGG: sal:Sala_2748 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
  
 0.917
Noca_3521
Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.906
Noca_1513
TIGRFAM: purine nucleoside phosphorylase; PFAM: purine and other phosphorylases, family 1; KEGG: oih:OB2345 purine nucleoside phosphorylase.
    
  0.902
Noca_4457
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mag:amb1303 aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homolog.
  
 
  0.900
Noca_4458
PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bja:blr6047 putative oxidoreductase protein.
     
  0.900
Noca_1300
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro03948 possible enoyl-CoA hydratase.
  
   0.803
Noca_1302
PFAM: ROK family protein; KEGG: sco:SCO6008 probable transcriptional repressor protein.
     
 0.764
rpsL
SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.
  
  
 0.736
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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