STRINGSTRING
Noca_1306 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1306" - N-acylglucosamine 2-epimerase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1306N-acylglucosamine 2-epimerase (404 aa)    
Predicted Functional Partners:
Noca_1305
Binding-protein-dependent transport system inner membrane protein (295 aa)
 
          0.875
Noca_1304
Binding-protein-dependent transport system inner membrane protein (298 aa)
 
          0.870
orn
Oligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (222 aa)
 
            0.759
Noca_1303
Extracellular solute-binding protein (432 aa)
 
          0.688
Noca_3526
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit (550 aa)
       
    0.475
Noca_1425
Phosphomannomutase (469 aa)
       
    0.475
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (448 aa)
       
    0.475
Noca_2539
Glucose-6-phosphate isomerase (555 aa)
       
    0.469
Noca_1427
Hypothetical protein (342 aa)
       
    0.469
Noca_1302
ROK family protein (400 aa)
         
  0.450
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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