STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1306PFAM: N-acylglucosamine 2-epimerase; KEGG: tfu:Tfu_1736 hypothetical protein. (404 aa)    
Predicted Functional Partners:
Noca_1304
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1965 binding-protein-dependent transport permease; TC 3.A.1.1.-.
  
  
 0.781
Noca_1305
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1964 binding-protein-dependent transport permease; TC 3.A.1.1.-.
     
 0.775
Noca_1303
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: pac:PPA1966 bacterial extracellular solute-binding protein; TC 3.A.1.1.-.
 
   
 0.620
Noca_3872
PFAM: PfkB domain protein; KEGG: rha:RHA1_ro02811 fructokinase.
   
 0.506
Noca_0062
PFAM: PfkB domain protein; KEGG: rha:RHA1_ro02811 fructokinase.
   
 0.428
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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