STRINGSTRING
Noca_1313 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1313" - PAS sensor protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1313PAS sensor protein (242 aa)    
Predicted Functional Partners:
Noca_1314
Type I phosphodiesterase/nucleotide pyrophosphatase (336 aa)
              0.623
Noca_1139
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (883 aa)
 
          0.601
Noca_1670
ATPase domain-containing protein (750 aa)
 
          0.577
Noca_1117
ATPase domain-containing protein (847 aa)
 
          0.559
Noca_1138
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (827 aa)
 
          0.541
Noca_1137
Diguanylate cyclase (721 aa)
 
          0.515
Noca_3598
Chemotaxis protein CheR (278 aa)
 
          0.476
Noca_1316
Beta-lactamase domain-containing protein (256 aa)
              0.475
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (282 aa)
              0.475
Noca_1392
PAS sensor protein (977 aa)
 
          0.443
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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