STRINGSTRING
Noca_1365 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1365" - Putative integral membrane protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1365Putative integral membrane protein (377 aa)    
Predicted Functional Partners:
Noca_1366
Putative ABC transporter (572 aa)
 
          0.886
Noca_3805
Hypothetical protein (233 aa)
   
          0.669
Noca_1367
Putative ABC transporter (555 aa)
              0.665
Noca_1364
Xaa-Pro aminopeptidase (480 aa)
              0.657
Noca_2971
Hypothetical protein (282 aa)
   
          0.611
Noca_1368
Single-strand binding protein (185 aa)
              0.557
Noca_2037
Hypothetical protein (154 aa)
   
          0.552
Noca_1854
Hypothetical protein (295 aa)
   
          0.538
Noca_4266
Hypothetical protein (350 aa)
   
          0.506
Noca_3648
Hypothetical protein (388 aa)
   
          0.492
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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