STRINGSTRING
Noca_1367 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1367" - Putative ABC transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1367Putative ABC transporter (555 aa)    
Predicted Functional Partners:
Noca_1366
Putative ABC transporter (572 aa)
 
       
0.831
Noca_1368
Single-strand binding protein (185 aa)
              0.796
Noca_2946
Hypothetical protein (198 aa)
   
          0.697
Noca_3335
Abortive infection protein (330 aa)
   
          0.689
Noca_1365
Putative integral membrane protein (377 aa)
              0.665
Noca_1787
Hypothetical protein (255 aa)
   
          0.626
Noca_2971
Hypothetical protein (282 aa)
   
          0.615
Noca_1943
Hypothetical protein (289 aa)
   
          0.607
Noca_1398
Cell envelope-related transcriptional attenuator (481 aa)
   
          0.607
Noca_4019
Metallophosphoesterase (480 aa)
   
          0.604
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (10%) [HD]