Noca_1367 protein (Nocardioides sp. JS614) - STRING interaction network

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Score

Noca_1367

KEGG: pac:PPA1638 putative ABC transporter. (555 aa)

Predicted Functional Partners:

rsmG

0.912

rplK

0.892

rplO

0.891

Noca_3052

0.857

rplU

0.847

rplM

0.828

rsfS

0.819

rplA

0.805

rplC

0.803

rplX

0.802

Your Current Organism:

Nocardioides sp. JS614

NCBI taxonomy Id: 196162
Other names: N. sp. JS614

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Noca_1367	Noca_3052	Noca_1367	Noca_3052	KEGG: pac:PPA1638 putative ABC transporter.	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.857
Noca_1367	rplA	Noca_1367	Noca_0697	KEGG: pac:PPA1638 putative ABC transporter.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.805
Noca_1367	rplC	Noca_1367	Noca_3905	KEGG: pac:PPA1638 putative ABC transporter.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.803
Noca_1367	rplK	Noca_1367	Noca_0696	KEGG: pac:PPA1638 putative ABC transporter.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.892
Noca_1367	rplM	Noca_1367	Noca_0889	KEGG: pac:PPA1638 putative ABC transporter.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.828
Noca_1367	rplO	Noca_1367	Noca_3886	KEGG: pac:PPA1638 putative ABC transporter.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.891
Noca_1367	rplU	Noca_1367	Noca_3451	KEGG: pac:PPA1638 putative ABC transporter.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.847
Noca_1367	rplX	Noca_1367	Noca_3894	KEGG: pac:PPA1638 putative ABC transporter.	LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.802
Noca_1367	rsfS	Noca_1367	Noca_1821	KEGG: pac:PPA1638 putative ABC transporter.	Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.819
Noca_1367	rsmG	Noca_1367	Noca_4695	KEGG: pac:PPA1638 putative ABC transporter.	16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 518 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.912
Noca_3052	Noca_1367	Noca_3052	Noca_1367	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	KEGG: pac:PPA1638 putative ABC transporter.	0.857
Noca_3052	rplC	Noca_3052	Noca_3905	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.915
Noca_3052	rplK	Noca_3052	Noca_0696	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.890
Noca_3052	rplM	Noca_3052	Noca_0889	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.902
Noca_3052	rplO	Noca_3052	Noca_3886	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.915
Noca_3052	rplU	Noca_3052	Noca_3451	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.928
Noca_3052	rplX	Noca_3052	Noca_3894	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.890
Noca_3052	rsfS	Noca_3052	Noca_1821	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.915
Noca_3052	rsmG	Noca_3052	Noca_4695	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 518 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.512
rplA	Noca_1367	Noca_0697	Noca_1367	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	KEGG: pac:PPA1638 putative ABC transporter.	0.805