STRINGSTRING
Noca_1376 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1376" - Globin in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1376Globin (124 aa)    
Predicted Functional Partners:
Noca_1377
OsmC family protein (141 aa)
              0.659
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
     
   
  0.509
Noca_0504
Cytochrome c assembly protein (341 aa)
 
          0.494
Noca_2200
Cytochrome c assembly protein (327 aa)
 
          0.430
Noca_1375
Hypothetical protein (165 aa)
              0.426
Noca_2555
NifU family SUF system FeS assembly protein (150 aa)
       
    0.421
Noca_1808
Trehalose synthase (571 aa)
              0.408
Noca_1381
Aminopeptidase N (863 aa)
              0.408
Noca_1378
Mechanosensitive ion channel MscS (342 aa)
              0.408
Noca_1267
Alpha amylase (645 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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