STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1384KEGG: fal:FRAAL5554 hypothetical protein. (184 aa)    
Predicted Functional Partners:
Noca_1382
TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rxy:Rxyl_2688 chromate transporter.
       0.697
Noca_1383
KEGG: mmc:Mmcs_3603 DsbA oxidoreductase.
       0.697
Noca_2344
PFAM: GCN5-related N-acetyltransferase; KEGG: sth:STH2617 aminoglycoside 6'-N-acetyltransferase.
  
     0.524
Noca_1381
Membrane alanyl aminopeptidase, Metallo peptidase, MEROPS family M01; TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: sco:SCO2643 aminopeptidase N.
       0.508
Noca_4155
KEGG: tfu:Tfu_1315 hypothetical protein.
  
     0.498
Noca_2368
PFAM: sporulation and cell division protein SsgA; KEGG: fra:Francci3_1359 sporulation and cell division protein SsgA.
  
     0.469
Noca_4266
KEGG: mmc:Mmcs_0096 hypothetical protein.
  
     0.461
Noca_1810
PFAM: peptidase M36, fungalysin; KEGG: rxy:Rxyl_2538 coagulation factor 5/8 type-like protein.
  
     0.453
Noca_1358
Hypothetical protein.
  
     0.418
Noca_2916
KEGG: sma:SAV2411 DNA-binding protein.
  
    0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.