STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1397PFAM: thioesterase superfamily protein; KEGG: sco:SCO3049 acyl-CoA hydrolase. (172 aa)    
Predicted Functional Partners:
Noca_0901
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV4968 hydrolase.
      
 0.640
Noca_1990
KEGG: tfu:Tfu_1973 acyl-carrier-protein S-malonyltransferase.
  
  
 0.548
Noca_1398
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tfu:Tfu_0017 cell envelope-related transcriptional attenuator.
       0.541
Noca_4502
PFAM: carboxyl transferase; Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro02935 acetyl-CoA carboxylase carboxyl transferase subunit.
  
  
 0.480
Noca_1803
PFAM: acetyl-CoA hydrolase/transferase; KEGG: fra:Francci3_1561 4-hydroxybutyrate coenzyme A transferase.
  
  
 0.430
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.