STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1406KEGG: sma:SAV5035 hypothetical protein. (246 aa)    
Predicted Functional Partners:
Noca_2575
KEGG: sma:SAV6479 hypothetical protein.
  
     0.688
Noca_0733
PFAM: Citrate synthase; KEGG: sma:SAV3859 putative citrate synthase; Belongs to the citrate synthase family.
  
 
 0.662
Noca_0888
KEGG: rxy:Rxyl_1676 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.662
Noca_1765
KEGG: sma:SAV2879 hypothetical protein.
  
     0.660
Noca_1529
KEGG: sma:SAV3056 hypothetical protein.
  
     0.646
Noca_2854
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1904 fatty acid oxidation complex alpha-subunit.
  
 
 0.639
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.639
Noca_1407
Mannose-6-phosphate isomerase, type 2; PFAM: Nucleotidyl transferase; KEGG: lxx:Lxx04570 mannose-1-phosphate guanylyltransferase.
       0.637
Noca_0348
PFAM: protein of unknown function DUF485; KEGG: sma:SAV6453 hypothetical protein.
 
  
 0.626
Noca_0906
KEGG: sma:SAV2206 hypothetical protein.
  
     0.602
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.