STRINGSTRING
Noca_1406 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1406" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1406Hypothetical protein (246 aa)    
Predicted Functional Partners:
Noca_2809
HNH endonuclease (255 aa)
   
          0.726
Noca_1280
HNH nuclease (414 aa)
   
          0.721
Noca_1741
HNH nuclease (414 aa)
   
          0.703
Noca_1463
HNH nuclease (414 aa)
   
          0.698
Noca_3444
Methionine synthase, vitamin-B12 independent (338 aa)
   
        0.695
Noca_4348
Hypothetical protein (160 aa)
   
          0.684
Noca_0189
LuxR family transcriptional regulator (340 aa)
   
          0.675
Noca_1407
Mannose-1-phosphate guanylyltransferase (GDP) (359 aa)
              0.675
Noca_3085
Hypothetical protein (140 aa)
   
        0.670
Noca_3929
Integral membrane protein (78 aa)
   
          0.628
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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