STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1435KEGG: lxx:Lxx05370 lipoprotein. (582 aa)    
Predicted Functional Partners:
Noca_1434
PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sco:SCO3012 putative two-component system histidine kinase.
 
  
 0.980
Noca_1433
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO3013 putative two-component system response regulator.
     
 0.804
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
  
     0.705
Noca_1436
KEGG: sco:SCO3010 hypothetical protein.
 
     0.672
Noca_3940
PFAM: RDD domain containing protein; KEGG: lxx:Lxx12090 hypothetical protein.
 
   
 0.666
Noca_1984
KEGG: sco:SCO2391 hypothetical protein.
  
     0.661
Noca_3861
PFAM: glycosyl transferase, family 39; KEGG: pac:PPA0523 putative dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.656
Noca_3585
KEGG: tfu:Tfu_2575 hypothetical protein.
  
     0.655
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.648
Noca_1413
KEGG: tfu:Tfu_2513 hypothetical protein.
 
     0.647
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.