STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1471KEGG: sco:SCO1819 integral membrane protein. (100 aa)    
Predicted Functional Partners:
Noca_0488
KEGG: sma:SAV4734 hypothetical protein.
  
     0.552
egtD
Conserved hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.550
Noca_3418
Hypothetical protein.
  
  
 0.528
Noca_3126
KEGG: sma:SAV6061 hypothetical protein.
  
     0.527
Noca_4232
KEGG: fal:FRAAL0941 putative thioredoxin.
  
     0.513
Noca_1468
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sco:SCO4430 secreted protein.
  
  
 0.500
Noca_1472
KEGG: sma:SAV3095 hypothetical protein.
       0.493
Noca_1703
Hypothetical protein.
  
     0.464
Noca_4041
Hypothetical protein; KEGG: fal:FRAAL6457 putative integral membrane protein.
  
     0.462
Noca_1771
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sco:SCO5386 anti-sigma factor antagonist.
  
    0.460
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.