STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1479PFAM: protein of unknown function DUF58; KEGG: mpa:MAP3217c hypothetical protein. (440 aa)    
Predicted Functional Partners:
Noca_1476
KEGG: sco:SCO6136 transmembrane protein.
 
     0.960
Noca_1478
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mmc:Mmcs_0154 ATPase associated with various cellular activities, AAA_3.
 
  
 0.888
Noca_1477
Hypothetical protein.
       0.773
Noca_1480
Hypothetical protein.
       0.773
Noca_1481
O(6)-alkylguanine repair protein YbaZ; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: tfu:Tfu_0522 hypothetical protein.
       0.773
Noca_1482
KEGG: rha:RHA1_ro04496 ABC transporter, ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.566
Noca_1483
PFAM: ABC-2 type transporter; KEGG: rha:RHA1_ro04497 ABC transporter, permease component.
       0.565
Noca_1475
Hypothetical protein.
       0.489
Noca_3912
KEGG: sco:SCO3020 integral membrane protein.
 
  
 0.480
Noca_3909
KEGG: sco:SCO3017 secreted protein.
 
  
 0.470
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.