Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_1491Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rha:RHA1_ro03489 probable carbon monoxide dehydrogenase large subunit. (803 aa)    
Predicted Functional Partners:
Noca_1490
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rha:RHA1_ro03490 probable carbon monoxide dehydrogenase small subunit (ferredoxin).
 
 0.977
Noca_1489
Carbon-monoxide dehydrogenase (acceptor); PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rha:RHA1_ro03491 dehydrogenase.
 
 
 0.971
Noca_1492
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rha:RHA1_ro03488 possible carbon monoxide dehydrogenase protein G.
 
  
 0.949
Noca_3970
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rha:RHA1_ro04977 carbon monoxide dehydrogenase small subunit (ferredoxin).
 
 0.934
Noca_4272
Purine hydroxylase delta subunit apoprotein; PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain.
 
 0.895
Noca_0229
Carbon monoxide dehydrogenase, small subunit; PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rxy:Rxyl_0111 (2Fe-2S)-binding protein.
 
 0.874
Noca_0607
PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rpb:RPB_3113 molybdopterin dehydrogenase, FAD-binding.
 
 
 0.872
Noca_0606
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gka:GKP18 carbon monoxide dehydrogenase small chain.
 
 0.869
Noca_0228
PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mmc:Mmcs_0489 carbon-monoxide dehydrogenase.
 
 
 0.859
Noca_0223
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rha:RHA1_ro05231 possible carbon monoxide dehydrogenase.
 
 0.858
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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