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Noca_1502 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1502" - Short-chain dehydrogenase/reductase SDR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1502Short-chain dehydrogenase/reductase SDR (251 aa)    
Predicted Functional Partners:
Noca_1501
Hypothetical protein (133 aa)
              0.859
Noca_4372
Short chain dehydrogenase (279 aa)
 
          0.703
Noca_4198
Short-chain dehydrogenase/reductase SDR (263 aa)
 
 
 
0.644
Noca_1285
Short-chain dehydrogenase/reductase SDR (255 aa)
 
 
 
0.634
Noca_1500
Hypothetical protein (231 aa)
              0.633
Noca_0202
Short-chain dehydrogenase/reductase SDR (239 aa)
 
 
 
0.632
Noca_1177
Short-chain dehydrogenase/reductase SDR (268 aa)
   
 
 
0.627
Noca_3684
Short-chain dehydrogenase/reductase SDR (256 aa)
   
 
 
0.626
Noca_1857
Short-chain dehydrogenase/reductase SDR (245 aa)
 
 
 
0.621
Noca_1834
Short-chain dehydrogenase/reductase SDR (257 aa)
   
 
 
0.618
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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