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Noca_1507 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1507" - ThiJ/PfpI domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1507ThiJ/PfpI domain-containing protein (191 aa)    
Predicted Functional Partners:
Noca_3645
Inosine-5’-monophosphate dehydrogenase (500 aa)
   
  0.867
Noca_2608
Inosine 5-monophosphate dehydrogenase (478 aa)
   
  0.867
Noca_2988
Transcriptional regulator (314 aa)
 
          0.660
Noca_1506
L-carnitine dehydratase/bile acid-inducible protein F (385 aa)
              0.646
Noca_1509
UvrD/REP helicase (1073 aa)
              0.630
Noca_1508
UvrD/REP helicase (1060 aa)
              0.630
Noca_3640
Inosine 5-monophosphate dehydrogenase (368 aa)
     
    0.592
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (278 aa)
     
      0.588
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (278 aa)
     
      0.561
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
     
      0.559
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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