STRINGSTRING
Noca_1508 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1508" - UvrD/REP helicase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1508UvrD/REP helicase (1060 aa)    
Predicted Functional Partners:
Noca_1509
UvrD/REP helicase (1073 aa)
 
   
0.946
Noca_3006
DNA polymerase I (889 aa)
   
 
  0.860
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (905 aa)
   
 
  0.739
Noca_3128
Hypothetical protein (601 aa)
   
  0.736
Noca_2250
DNA primase catalytic core (1976 aa)
   
 
  0.725
Noca_1580
DNA primase catalytic core (1797 aa)
   
 
  0.725
Noca_0133
DEAD/DEAH box helicase (714 aa)
   
 
  0.724
Noca_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (408 aa)
   
 
  0.711
Noca_4657
DnaB domain-containing protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (824 aa)
 
 
  0.704
Noca_2494
Hypothetical protein (115 aa)
   
          0.703
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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