STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1529KEGG: sma:SAV3056 hypothetical protein. (202 aa)    
Predicted Functional Partners:
Noca_1528
PFAM: PDZ/DHR/GLGF domain protein; KEGG: fal:FRAAL6029 putative secreted protein.
       0.855
Noca_1530
PFAM: protein of unknown function UPF0182; KEGG: sco:SCO5204 integral membrane protein.
       0.855
Noca_1527
Hypothetical protein.
       0.705
Noca_1406
KEGG: sma:SAV5035 hypothetical protein.
  
     0.646
Noca_1526
PFAM: molybdopterin biosynthesis MoaE; KEGG: sma:SAV3059 putative molybdopterin biosynthesis protein E.
       0.574
Noca_1525
KEGG: sma:SAV3061 hypothetical protein.
       0.512
Noca_3132
KEGG: rha:RHA1_ro05908 hypothetical protein.
  
     0.491
Noca_2297
Hypothetical protein.
  
     0.433
Noca_0162
PFAM: SEC-C motif domain protein; KEGG: sma:SAV4226 hypothetical protein.
  
     0.424
Noca_0795
KEGG: sco:SCO3177 hypothetical protein.
  
     0.416
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.