STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1545KEGG: fra:Francci3_1733 putative membrane protein. (128 aa)    
Predicted Functional Partners:
Noca_1547
KEGG: fra:Francci3_3328 putative membrane protein.
 
     0.932
Noca_1543
PFAM: type II secretion system protein; KEGG: sco:SCO4528 integral membrane protein.
 
  
 0.930
Noca_1539
PFAM: SAF domain; KEGG: sco:SCP1.167 hypothetical protein.
 
    0.925
Noca_1542
KEGG: sco:SCO4527 integral membrane protein.
 
  
 0.923
Noca_1540
KEGG: sco:SCO4525 hypothetical protein.
 
   
 0.916
Noca_1546
PFAM: TadE family protein; KEGG: sco:SCP1.174 hypothetical protein.
 
     0.915
Noca_1538
KEGG: fra:Francci3_1784 hypothetical protein.
 
     0.882
Noca_1548
PFAM: Peptidoglycan-binding LysM; KEGG: sma:SAV192 hypothetical protein.
 
     0.810
Noca_1541
PFAM: type II secretion system protein E; KEGG: sco:SCO4526 protein kinase.
  
  
 0.794
Noca_1544
Hypothetical protein.
       0.752
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.