STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1563PFAM: glycosyl transferase, group 1; KEGG: mac:MA0798 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein. (743 aa)    
Predicted Functional Partners:
Noca_1564
PFAM: LmbE family protein; KEGG: mpa:MAP2993 hypothetical protein.
 
  
 0.892
Noca_1562
PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_2271 dolichyl-phosphate beta-D-mannosyltransferase.
  
 
 0.846
Noca_1561
PFAM: phosphoesterase, PA-phosphatase related; KEGG: vpa:VP2408 hypothetical protein.
 
     0.820
Noca_0920
KEGG: cya:CYA_1212 phosphate uptake transporter (PhoT) ABC transporter family, substrate-binding protein; TC 3.A.1.7.1.
 
  
 0.695
Noca_1678
PFAM: CDP-alcohol phosphatidyltransferase; sulfatase; KEGG: sma:SAV5650 hypothetical protein.
  
  
 0.681
Noca_4190
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll8574 hypothetical protein.
 
   
 0.669
Noca_0456
PFAM: glycosyl transferase, family 2; KEGG: sco:SCO2590 glycosyltransferase.
 
 
 0.643
Noca_0267
Maltooligosyl trehalose hydrolase; KEGG: nfa:nfa18050 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
  
 0.633
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.633
Noca_2899
Hypothetical protein.
  
     0.596
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.