STRINGSTRING
Noca_1572 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1572" - ATP-binding protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1572ATP-binding protein (496 aa)    
Predicted Functional Partners:
Noca_1571
Hypothetical protein (502 aa)
 
          0.967
Noca_1576
Type IV secretory pathway VirD4 components-like protein (453 aa)
 
          0.931
Noca_2242
Hypothetical protein (501 aa)
 
     
  0.876
Noca_1570
Hypothetical protein (457 aa)
              0.871
Noca_1568
Hypothetical protein (90 aa)
              0.868
Noca_1569
Hypothetical protein (259 aa)
              0.865
Noca_1567
Hypothetical protein (240 aa)
              0.865
Noca_2246
Type IV secretory pathway VirD4 components-like protein (506 aa)
 
          0.862
Noca_1574
Hypothetical protein (116 aa)
              0.859
Noca_1573
Peptidase M23B (348 aa)
              0.859
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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