STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1589PFAM: Eco57I restriction endonuclease; KEGG: stc:str1375 type II restriction-modification system restriction subunit. (351 aa)    
Predicted Functional Partners:
Noca_1588
PFAM: type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: spd:SPD_1079 type II restriction endonuclease, putative.
     0.994
Noca_1587
KEGG: stc:str1376 type II restriction-modification system modification subunit.
 
 0.985
Noca_1104
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: xfa:XF2728 type I restriction-modification system DNA methylase.
  
 
 0.751
Noca_1586
PFAM: restriction endonuclease; KEGG: mbo:Mb2557c probable restriction system protein MRR.
  
  
 0.729
Noca_1105
PFAM: restriction modification system DNA specificity domain; KEGG: xfa:XF2726 type I restriction-modification system specificity determinant.
  
 
 0.504
Noca_1106
PFAM: restriction modification system DNA specificity domain; KEGG: hpa:HPAG1_0832 HP0790-like protein.
  
 
 0.504
Noca_3803
Hypothetical protein; KEGG: fra:Francci3_3745 superfamily I DNA and RNA helicases and helicase subunits-like.
  
    0.489
Noca_3741
Hypothetical protein.
  
  
 0.434
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.