STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1593KEGG: fal:FRAAL6356 putative tyrosine recombinase XerD; Belongs to the 'phage' integrase family. (184 aa)    
Predicted Functional Partners:
Noca_1590
PFAM: phage integrase family protein; KEGG: fal:FRAAL6356 putative tyrosine recombinase XerD.
 
     0.673
Noca_1724
PFAM: phage integrase family protein; KEGG: nfa:nfa7110 putative phage integrase; Belongs to the 'phage' integrase family.
  
     0.633
Noca_1966
PFAM: phage integrase family protein; KEGG: mmc:Mmcs_1422 phage integrase; Belongs to the 'phage' integrase family.
  
     0.565
Noca_1122
Hypothetical protein; KEGG: eba:ebA1616 general secretion protein H.
  
   
 0.535
Noca_3179
KEGG: xcb:XC_3880 hypothetical protein.
  
    0.421
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.