STRINGSTRING
Noca_1597 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1597" - GtrA family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1597GtrA family protein (154 aa)    
Predicted Functional Partners:
Noca_0476
Xylose isomerase domain-containing protein (262 aa)
   
          0.746
Noca_1984
Hypothetical protein (172 aa)
   
          0.723
Noca_1596
Mannose-6-phosphate isomerase (134 aa)
         
  0.695
Noca_1598
Response regulator receiver (226 aa)
              0.640
Noca_1600
Hypothetical protein (170 aa)
              0.639
Noca_1599
ATPase domain-containing protein (453 aa)
              0.639
Noca_0914
Hypothetical protein (150 aa)
   
          0.631
Noca_0008
Hypothetical protein (172 aa)
   
          0.587
Noca_0465
Hypothetical protein (108 aa)
   
        0.576
Noca_0934
Hypothetical protein (88 aa)
   
          0.560
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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