STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1601PFAM: protein of unknown function DUF347; KEGG: fal:FRAAL6358 putative integral membrane protein (partial match). (290 aa)    
Predicted Functional Partners:
Noca_1603
PFAM: phosphoesterase; KEGG: fal:FRAAL3218 putative acid phosphatase.
 
     0.843
Noca_1602
Hypothetical protein; KEGG: fra:Francci3_2390 glycosyl transferase, family 39.
       0.779
Noca_1605
PFAM: protein of unknown function DUF214; KEGG: sco:SCO6365 putative integral membrane protein.
 
     0.639
Noca_2124
PFAM: high-affinity nickel-transporter; KEGG: mpa:MAP2924 NicT; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.476
Noca_4586
Hypothetical protein.
  
     0.466
Noca_1604
PFAM: glycosyl transferase, family 2; KEGG: ade:Adeh_2624 dolichyl-phosphate beta-D-mannosyltransferase.
       0.443
Noca_4608
PFAM: Na+/solute symporter; KEGG: sma:SAV3025 putative proline permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.422
Noca_2772
PFAM: Cupin 2, conserved barrel domain protein; KEGG: sus:Acid_7653 cupin 2, conserved barrel domain protein.
  
     0.421
Noca_1296
PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa4770 putative transporter.
  
     0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.