STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1647KEGG: nfa:pnf2590 putative alkylmercury lyase. (99 aa)    
Predicted Functional Partners:
Noca_1646
PFAM: regulatory protein, MerR; KEGG: mbo:Mb3367 probable transcriptional regulatory protein (probably MerR-family).
 
     0.655
Noca_1648
Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sep:SE0080 regulatory protein.
 
     0.527
Noca_3211
KEGG: nfa:nfa6110 hypothetical protein.
  
     0.511
Noca_0145
KEGG: cgb:cg1481 hypothetical protein.
  
     0.443
Noca_1571
Hypothetical protein; KEGG: fal:FRAAL0036 putative integral membrane protein.
  
     0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.