STRINGSTRING
Noca_1664 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1664" - TetR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1664TetR family transcriptional regulator (189 aa)    
Predicted Functional Partners:
Noca_1666
Putative ABC antibiotics transporter (548 aa)
              0.640
Noca_1665
ABC transporter-like protein (316 aa)
              0.640
Noca_3076
Hypothetical protein (153 aa)
   
          0.533
Noca_2745
Putative CoA transferase subunit beta (256 aa)
   
          0.533
Noca_1663
Heavy metal transport/detoxification protein (77 aa)
              0.479
Noca_1662
Heavy metal translocating P-type ATPase (656 aa)
              0.479
Noca_4057
Hypothetical protein (910 aa)
   
          0.472
Noca_1667
Hypothetical protein (358 aa)
              0.461
Noca_1817
Hypothetical protein (497 aa)
   
          0.452
Noca_1668
Putative dehydrogenase (689 aa)
              0.450
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (10%) [HD]