Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1667Male sterility C-terminal domain; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: sru:SRU_2653 3-beta hydroxysteroid dehydrogenase/isomerase family. (358 aa)    
Predicted Functional Partners:
Noca_1232
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro06221 possible dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.946
Noca_1669
Diacylglycerol O-acyltransferase; PFAM: condensation domain protein; protein of unknown function UPF0089; KEGG: sru:SRU_2506 uncharacterized protein family (UPF0089).
 
  
 0.881
Noca_1668
KEGG: rfr:Rfer_1964 putative dehydrogenase.
       0.765
Noca_2792
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro06855 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
 
  
 0.653
Noca_1665
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro06063 probable ABC transporter, ATP-binding component.
       0.533
Noca_1666
KEGG: rha:RHA1_ro06064 possible ABC antibiotics transporter.
       0.533
Noca_3706
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro08645 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
 
   
 0.494
Noca_0408
PFAM: Thrombospondin type 3 repeat; KEGG: ade:Adeh_3645 outer membrane protein, OmpA/MotB family.
  
     0.423
Noca_1042
KEGG: sco:SCO2693 oxygenase (secreted protein).
  
  
 0.420
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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