STRINGSTRING
Noca_1667 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1667" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1667Hypothetical protein (358 aa)    
Predicted Functional Partners:
Noca_1669
Diacylglycerol O-acyltransferase (490 aa)
 
          0.873
Noca_1668
Putative dehydrogenase (689 aa)
              0.834
Noca_1232
Short-chain dehydrogenase/reductase SDR (305 aa)
 
          0.739
Noca_3113
AMP-dependent synthetase and ligase (600 aa)
 
          0.674
Noca_3617
AMP-dependent synthetase and ligase (608 aa)
 
          0.626
Noca_1666
Putative ABC antibiotics transporter (548 aa)
              0.601
Noca_1665
ABC transporter-like protein (316 aa)
              0.601
Noca_2792
Diacylglycerol O-acyltransferase (488 aa)
   
          0.553
Noca_2618
AMP-dependent synthetase and ligase (610 aa)
 
          0.536
Noca_3479
PGAP1 family protein (378 aa)
   
          0.489
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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