STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1669Diacylglycerol O-acyltransferase; PFAM: condensation domain protein; protein of unknown function UPF0089; KEGG: sru:SRU_2506 uncharacterized protein family (UPF0089). (490 aa)    
Predicted Functional Partners:
Noca_1667
Male sterility C-terminal domain; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: sru:SRU_2653 3-beta hydroxysteroid dehydrogenase/isomerase family.
 
  
 0.861
Noca_2917
Male sterility C-terminal domain; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KR; KEGG: hch:HCH_04995 short-chain alcohol dehydrogenase-like protein.
 
  
 0.826
Noca_1668
KEGG: rfr:Rfer_1964 putative dehydrogenase.
 
     0.667
Noca_1998
TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; KEGG: fal:FRAAL3759 putative fatty acyl coA reductase.
  
  
 0.625
Noca_3479
PFAM: PGAP1 family protein; KEGG: rha:RHA1_ro05901 hypothetical protein.
  
     0.618
Noca_0486
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: fra:Francci3_0479 NAD-dependent epimerase/dehydratase.
  
   
 0.572
Noca_1170
PFAM: protein of unknown function UPF0261; KEGG: hma:rrnB0188 hypothetical protein.
  
  
 0.558
Noca_1232
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro06221 possible dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.537
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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