STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1703Hypothetical protein. (249 aa)    
Predicted Functional Partners:
Noca_1702
PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO4117 hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.895
Noca_4019
PFAM: metallophosphoesterase; KEGG: swo:Swol_2226 hypothetical protein.
  
     0.656
Noca_4671
Hypothetical protein.
  
     0.626
Noca_2575
KEGG: sma:SAV6479 hypothetical protein.
  
     0.625
Noca_3605
KEGG: sma:SAV3466 integral membrane protein.
  
     0.599
Noca_3126
KEGG: sma:SAV6061 hypothetical protein.
  
     0.594
Noca_4669
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sco:SCO6994 hypothetical protein.
  
     0.479
Noca_1471
KEGG: sco:SCO1819 integral membrane protein.
  
     0.464
Noca_3125
KEGG: mmc:Mmcs_3288 hypothetical protein.
  
     0.460
Noca_1704
PFAM: protein of unknown function DUF159; KEGG: rha:RHA1_ro08499 hypothetical protein; Belongs to the SOS response-associated peptidase family.
       0.459
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.