Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1733Hypothetical protein. (137 aa)    
Predicted Functional Partners:
Noca_1734
Hypothetical protein; KEGG: fra:Francci3_2783 conserved hypothetical protein.
 
     0.812
Noca_1732
Hypothetical protein.
       0.773
Noca_2870
PFAM: protein of unknown function UPF0047; KEGG: fra:Francci3_3056 protein of unknown function UPF0047.
  
  
 0.574
Noca_0660
KEGG: lxx:Lxx05505 hypothetical protein.
  
     0.570
Noca_1735
Arylsulfatase A and related enzymes-like protein; KEGG: bja:blr3900 probable arylsulfatase.
       0.526
Noca_0123
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3220 transcriptional regulator, TetR family.
  
     0.507
Noca_0914
KEGG: sma:SAV3169 hypothetical protein.
 
     0.472
Noca_1910
Hypothetical protein; KEGG: sus:Acid_2373 calcium-binding EF-hand-containing protein.
  
     0.429
Noca_4463
PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV4232 hypothetical protein.
  
     0.415
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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