STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1769PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04560 probable transporter, MFS superfamily. (388 aa)    
Predicted Functional Partners:
Noca_2144
PFAM: amidohydrolase 2; KEGG: rba:RB9860 hypothetical protein.
 
  
 0.573
Noca_3184
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.
  
  
 0.526
Noca_1768
KEGG: nfa:nfa33290 putative transcriptional regulator.
       0.512
Noca_4400
PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06491 transporter, MFS superfamily.
  
  
 0.428
Noca_1022
Hypothetical protein; KEGG: mmc:Mmcs_0550 putative ABC transporter membrane protein.
  
     0.402
Noca_1322
Hypothetical protein; KEGG: sco:SCO6361 integral membrane protein.
  
     0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.