STRINGSTRING
Noca_1776 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1776" - Integral membrane protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1776Integral membrane protein (603 aa)    
Predicted Functional Partners:
Noca_1775
Hypothetical protein (352 aa)
              0.859
Noca_3818
Integral membrane protein (315 aa)
   
          0.769
Noca_0266
Lipoprotein (234 aa)
   
          0.736
Noca_0518
Peptidoglycan binding domain-containing protein (309 aa)
   
          0.716
Noca_4243
Hypothetical protein (286 aa)
 
          0.698
Noca_3958
Hypothetical protein (118 aa)
   
          0.693
Noca_3127
Hypothetical protein (88 aa)
   
          0.692
Noca_4448
Putative integral membrane protein (239 aa)
   
          0.691
Noca_3929
Integral membrane protein (78 aa)
   
          0.671
Noca_0029
N-acetyltransferase GCN5 (189 aa)
   
          0.668
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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