STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1787KEGG: tfu:Tfu_2558 hypothetical protein. (255 aa)    
Predicted Functional Partners:
Noca_2457
KEGG: tfu:Tfu_1823 hypothetical protein.
  
     0.772
Noca_2827
PFAM: protein of unknown function DUF1707; KEGG: tfu:Tfu_0460 hypothetical protein.
  
     0.769
Noca_3152
PFAM: PspA/IM30 family protein; KEGG: sco:SCO2168 putative phage shock protein A.
  
     0.758
Noca_1800
KEGG: fal:FRAAL2022 hypothetical protein.
  
     0.678
Noca_1943
Hypothetical protein; KEGG: rha:RHA1_ro10028 possible peptidase.
  
     0.670
Noca_1062
PFAM: protein of unknown function DUF1707; KEGG: sma:SAV5183 hypothetical protein.
  
     0.667
Noca_0365
PFAM: type II secretion system protein; KEGG: sco:SCO3555 integral membrane protein.
  
     0.657
Noca_1427
KEGG: pac:PPA1688 hypothetical protein.
  
     0.643
Noca_1786
Hypothetical protein.
       0.620
Noca_0276
KEGG: tfu:Tfu_0025 hypothetical protein.
  
     0.619
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.