STRINGSTRING
Noca_1817 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1817" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1817Hypothetical protein (497 aa)    
Predicted Functional Partners:
Noca_3950
Secreted protein (907 aa)
   
          0.760
Noca_3758
Secreted protein (911 aa)
   
          0.755
Noca_3076
Hypothetical protein (153 aa)
   
          0.750
Noca_0708
Virulence factor Mce family protein (424 aa)
   
          0.742
Noca_1471
Integral membrane protein (100 aa)
   
          0.736
Noca_0703
Virulence factor Mce family protein (425 aa)
   
          0.712
Noca_2824
Virulence factor Mce family protein (436 aa)
   
          0.701
Noca_2819
Virulence factor Mce family protein (422 aa)
   
          0.694
Noca_0707
Virulence factor Mce family protein (472 aa)
   
          0.685
Noca_3709
Peptidase S15 (519 aa)
   
          0.677
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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