Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Noca_1829PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO1692 oxidoreductase. (265 aa)    
Predicted Functional Partners:
Noca_1828
acetyl-CoA acetyltransferase; KEGG: nfa:nfa34130 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.774
Noca_0202
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sil:SPO0595 gluconate 5-dehydrogenase.
 
 
   0.682
Noca_3380
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_5285 short-chain dehydrogenase/reductase SDR.
 
 
   0.675
Noca_4009
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3395 short-chain dehydrogenase/reductase SDR.
 
 
   0.673
Noca_4372
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro01522 short chain dehydrogenase.
 
 
   0.653
Noca_1846
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: dsy:DSY2660 hypothetical protein.
 
 
   0.640
Noca_4089
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO2490 dehydrogenase (secreted protein).
 
   
 0.633
Noca_0689
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_3244 short-chain dehydrogenase/reductase SDR.
 
 
   0.626
Noca_1847
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: dsy:DSY2660 hypothetical protein.
 
 
   0.622
Noca_1177
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: afu:AF1207 2-deoxy-D-gluconate 3-dehydrogenase (KduD).
 
 
   0.598
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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