STRINGSTRING
Noca_1869 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1869" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1869Hypothetical protein (189 aa)    
Predicted Functional Partners:
Noca_1870
Regulatory protein MarR (158 aa)
         
  0.813
nhaA2
Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons (616 aa)
     
      0.633
Noca_1868
Hypothetical protein (112 aa)
   
        0.615
Noca_3374
MarR family transcriptional regulator (159 aa)
 
     
  0.586
Noca_1871
Cytochrome P450 (379 aa)
              0.514
Noca_1370
Regulatory protein MarR (164 aa)
         
  0.510
Noca_4003
Extradiol ring-cleavage dioxygenase III subunit B (258 aa)
         
  0.482
Noca_1866
Hypothetical protein (305 aa)
              0.431
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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