STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1879KEGG: rha:RHA1_ro02551 hypothetical protein. (121 aa)    
Predicted Functional Partners:
Noca_1545
KEGG: fra:Francci3_1733 putative membrane protein.
  
     0.653
Noca_1540
KEGG: sco:SCO4525 hypothetical protein.
  
     0.647
Noca_1878
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: eli:ELI_09720 esterase.
       0.554
Noca_1875
Hypothetical protein.
       0.494
Noca_1876
KEGG: sus:Acid_6922 natural resistance-associated macrophage protein.
       0.494
Noca_1877
Hypothetical protein.
       0.494
Noca_1542
KEGG: sco:SCO4527 integral membrane protein.
  
     0.486
Noca_3957
PFAM: CutC family protein; KEGG: pac:PPA0471 putative copper homeostasis protein CutC; Belongs to the CutC family.
 
     0.485
Noca_1543
PFAM: type II secretion system protein; KEGG: sco:SCO4528 integral membrane protein.
  
     0.468
Noca_2350
KEGG: sma:SAV2128 hypothetical protein.
  
     0.462
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.