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Noca_1937 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1937" - Periplasmic solute binding protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1937Periplasmic solute binding protein (311 aa)    
Predicted Functional Partners:
Noca_1936
ABC transporter-like protein (287 aa)
 
 
  0.993
Noca_1935
ABC-3 protein (337 aa)
 
  0.989
Noca_1934
Zinc uptake regulator (135 aa)
 
     
  0.937
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly) (471 aa)
         
  0.632
Noca_4251
FUR family nickel uptake regulator (139 aa)
 
     
  0.623
Noca_1938
Periplasmic component of the Tol biopolymer transport system-like (593 aa)
              0.610
Noca_0874
Ferric-uptake regulator (146 aa)
 
     
  0.600
Noca_1939
Hypothetical protein (106 aa)
              0.536
Noca_0839
Ferric-uptake regulator (143 aa)
 
     
  0.535
Noca_0779
Iron dependent repressor (228 aa)
         
  0.479
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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