STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1964KEGG: sco:SCO0559 hypothetical protein. (340 aa)    
Predicted Functional Partners:
Noca_1965
PFAM: protein of unknown function DUF72; KEGG: rha:RHA1_ro02437 hypothetical protein.
       0.668
Noca_4524
KEGG: bps:BPSS1911 hypothetical protein.
  
     0.616
Noca_1963
PFAM: LmbE family protein; KEGG: sco:SCO0804 hypothetical protein.
       0.573
Noca_4463
PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV4232 hypothetical protein.
  
   
 0.511
Noca_4384
KEGG: ret:RHE_CH02031 putative gualylate cyclase protein.
 
     0.492
Noca_3532
Hypothetical protein.
  
     0.458
Noca_1907
Hypothetical protein.
  
    0.449
Noca_4330
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sma:SAV6085 hypothetical protein.
 
     0.435
Noca_2281
Hypothetical protein; KEGG: sus:Acid_1699 zinc finger, RanBP2-type.
 
   
 0.427
Noca_2899
Hypothetical protein.
  
     0.425
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.