STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1966PFAM: phage integrase family protein; KEGG: mmc:Mmcs_1422 phage integrase; Belongs to the 'phage' integrase family. (403 aa)    
Predicted Functional Partners:
Noca_1967
Hypothetical protein.
       0.773
Noca_1593
KEGG: fal:FRAAL6356 putative tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.565
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
    0.459
Noca_1436
KEGG: sco:SCO3010 hypothetical protein.
  
    0.427
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.418
Noca_1968
Hypothetical protein.
       0.413
Noca_1969
Hypothetical protein.
       0.413
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.