STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1978PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase. (482 aa)    
Predicted Functional Partners:
Noca_2713
PFAM: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain containing protein.
 
 
 
 0.891
Noca_0026
PFAM: protein phosphatase 2C domain protein; KEGG: sco:SCO3845 putative protein phosphatase.
 
 0.865
Noca_1982
PFAM: protein phosphatase 2C domain protein; KEGG: cef:CE0037 putative protein phosphatase.
 
 0.865
Noca_3942
PFAM: protein phosphatase 2C domain protein; KEGG: lxx:Lxx12030 protein phosphatase.
 
 
 0.865
Noca_1977
KEGG: mca:MCA1204 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.736
Noca_3086
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sco:SCO2110 putative eukaryotic-type serine/threonine protein kinase.
 
 
0.673
Noca_0022
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3066 tyrosine protein kinase:serine/threonine protein kinase:PASTA.
 
 
0.671
Noca_0027
PFAM: Forkhead-associated protein; KEGG: tfu:Tfu_3061 FHA domain protein.
 
 
 
 0.612
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
  
    0.534
Noca_1980
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: dra:DR1031 (S)-2-hydroxy-acid oxidase.
       0.515
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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