STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1983PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro05212 probable hydrolase. (310 aa)    
Predicted Functional Partners:
Noca_1982
PFAM: protein phosphatase 2C domain protein; KEGG: cef:CE0037 putative protein phosphatase.
   
   0.736
Noca_3720
KEGG: nfa:nfa29830 hypothetical protein.
  
     0.710
Noca_4152
KEGG: mpa:MAP2481c hypothetical protein.
 
  
 0.687
Noca_1981
KEGG: fra:Francci3_3166 tetratricopeptide TPR_2.
  
   0.656
Noca_4010
KEGG: mmc:Mmcs_1152 hypothetical protein.
  
     0.625
Noca_3635
KEGG: mbo:Mb3194 hypothetical protein.
  
     0.611
Noca_3636
PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_1560 aminoglycoside phosphotransferase.
 
     0.560
Noca_1984
KEGG: sco:SCO2391 hypothetical protein.
       0.494
Noca_2818
KEGG: sma:SAV5893 hypothetical protein.
 
 0.478
Noca_4369
KEGG: mmc:Mmcs_2007 hypothetical protein.
 
     0.462
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.