STRINGSTRING
Noca_2002 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2002" - Dyp-type peroxidase family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2002Dyp-type peroxidase family protein (381 aa)    
Predicted Functional Partners:
Noca_2003
Hypothetical protein (182 aa)
 
          0.951
Noca_3388
Iron permease FTR1 (294 aa)
 
     
  0.800
Noca_0050
Dyp-type peroxidase family protein (481 aa)
   
          0.758
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (284 aa)
 
     
  0.626
Noca_2004
Hypothetical protein (234 aa)
              0.585
Noca_4343
Catalase domain-containing protein; Has an organic peroxide-dependent peroxidase activity (303 aa)
 
   
  0.471
Noca_2172
MMPL domain-containing protein (784 aa)
   
          0.409
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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