STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2002TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: lxx:Lxx21010 iron-dependent peroxidase. (381 aa)    
Predicted Functional Partners:
Noca_2003
PFAM: protein of unknown function DUF461; KEGG: mmc:Mmcs_1601 protein of unknown function DUF461.
 
  
 0.964
Noca_3388
PFAM: iron permease FTR1; KEGG: sco:SCO2277 high-affinity iron transporter.
 
  
 0.813
Noca_0050
TIGRFAM: Dyp-type peroxidase family; KEGG: rpc:RPC_1956 Tat-translocated enzyme.
  
     0.628
Noca_4042
Hypothetical protein.
  
  
 0.612
Noca_2004
KEGG: sma:SAV899 hypothetical protein.
       0.534
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.