STRINGSTRING
Noca_2005 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2005" - Protein kinase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2005Protein kinase (283 aa)    
Predicted Functional Partners:
Noca_3942
Protein phosphatase 2C domain-containing protein (280 aa)
  0.964
Noca_1982
Protein phosphatase 2C domain-containing protein (268 aa)
 
  0.964
Noca_0026
Protein phosphatase 2C domain-containing protein (438 aa)
  0.964
Noca_4684
Serine/threonine protein kinase (622 aa)
   
          0.778
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (213 aa)
     
  0.736
Noca_0939
Cystathionine beta-synthase (462 aa)
   
  0.720
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (110 aa)
     
  0.690
Noca_3086
Protein kinase (658 aa)
 
0.682
Noca_2713
Forkhead-associated protein (176 aa)
 
 
  0.671
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (194 aa)
 
  0.669
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (6%) [HD]