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Noca_2011 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2011" - HSR1-like GTP-binding protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2011HSR1-like GTP-binding protein (648 aa)    
Predicted Functional Partners:
Noca_2010
NifU domain-containing protein (181 aa)
 
          0.945
Noca_2012
FeoA family protein (81 aa)
 
          0.935
Noca_4267
Hypothetical protein (110 aa)
 
        0.562
Noca_2921
Hypothetical protein (93 aa)
 
        0.562
Noca_3786
Hypothetical protein (103 aa)
   
        0.479
Noca_0141
Hypothetical protein (87 aa)
   
        0.479
Noca_0779
Iron dependent repressor (228 aa)
         
  0.478
Noca_1934
Zinc uptake regulator (135 aa)
 
     
  0.476
Noca_4251
FUR family nickel uptake regulator (139 aa)
         
  0.407
Noca_0874
Ferric-uptake regulator (146 aa)
         
  0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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