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Noca_2017 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2017" - Ribonuclease II in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2017Ribonuclease II (467 aa)    
Predicted Functional Partners:
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (242 aa)
   
  0.997
Noca_3676
3’-5’ exonuclease (442 aa)
   
  0.978
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (117 aa)
         
    0.960
Noca_0957
Periplasmic binding protein (282 aa)
     
      0.878
Noca_4681
HDIG domain-containing protein (483 aa)
   
  0.864
Noca_2016
Hypothetical protein (251 aa)
 
          0.791
Noca_2718
CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase (200 aa)
       
      0.769
Noca_2380
CDP-diacylglycerol inositol 3-phosphatidyltransferase (206 aa)
       
      0.769
Noca_2320
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (202 aa)
       
      0.769
Noca_2067
CDP-alcohol phosphatidyltransferase (215 aa)
       
      0.769
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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